• Fisheries acoustics and Acoustic Target Classification - Report from the COGMAR/CRIMAC workshop on machine learning methods in fisheries acoustics 

      Handegard, Nils Olav; Andersen, Lars Nonboe; Brautaset, Olav; Choi, Changkyu; Eliassen, Inge Kristian; Heggelund, Yngve; Hestnes, Arne Johan; Malde, Ketil; Osland, Håkon; Ordonez, Alba; Patel, Ruben; Pedersen, Geir; Umar, Ibrahim; Engeland, Tom Van; Vatnehol, Sindre (Research report; Forskningsrapport, 2021-06-15)
      This report documents a workshop organised by the COGMAR and CRIMAC projects. The objective of the workshop was twofold. The first objective was to give an overview of ongoing work using machine learning for Acoustic Target Classification (ATC). Machine learning methods, and in particular deep learning models, are currently being used across a range of different fields, including ATC. The objective ...
    • The genome sequence of Atlantic cod reveals a unique immune system 

      Star, Bastiaan; Nederbragt, Alexander Johan; Jentoft, Sissel; Grimholt, Unni; Malmstrøm, Martin; Gregers, Tone Fredsvik; Rounge, Trine Ballestad; Paulsen, Jonas; Solbakken, Monica Hongrø; Sharma, Animesh; Wetten, Ola Frang; Lanzén, Anders; Winer, Roger; Knight, James; Vogel, Jan-Hinnerk; Aken, Bronwen; Andersen, Øivind; Lagesen, Karin; Tooming-Klunderud, Ave; Edvardsen, Rolf; Kirubakaran, G. Tina; Espelund, Mari; Nepal, Chirag; Previti, A. Christopher; Karlsen, Bård Ove; Moum, Truls; Skage, Morten; Berg, Paul Ragnar; Gjøen, Tor; Kuhl, Heiner; Thorsen, Jim; Malde, Ketil; Reinhardt, Richard; Du, Lei; Johansen, Steinar Daae; Searle, Steve; Lien, Sigbjørn; Nilsen, Frank; Jonassen, Inge; Omholt, Stig W; Stenseth, Nils Christian; Jakobsen, Kjetill Sigurd (Journal article; Tidsskriftartikkel; Peer reviewed, 2011-08-10)
      Atlantic cod (Gadus morhua) is a large, cold-adapted teleost that sustains long-standing commercial fisheries and incipient aquaculture1, 2. Here we present the genome sequence of Atlantic cod, showing evidence for complex thermal adaptations in its haemoglobin gene cluster and an unusual immune architecture compared to other sequenced vertebrates. The genome assembly was obtained exclusively by 454 ...
    • The salmon louse genome may be much larger than sequencing suggests. 

      Wyngaard, Grace; Skern-Mauritzen, Rasmus; Malde, Ketil; Prendergast, Rachel; Peruzzi, Stefano (Journal article; Tidsskriftartikkel; Peer reviewed, 2022-04-22)
      The genome size of organisms impacts their evolution and biology and is often assumed to be characteristic of a species. Here we present the frst published estimates of genome size of the ecologically and economically important ectoparasite, Lepeophtheirus salmonis (Copepoda, Caligidae). Four independent L. salmonis genome assemblies of the North Atlantic subspecies Lepeophtheirus salmonis ...